Quantitative Fisheries

Class Reading: quantitative-fisheries-pdf-portfoilio

Course Syllabus: syllabus-quant-fish-mgt-v02

2 Fishery Science and Ecological Modeling

3 Mortality rate estimation, Catch Curves, Gear selectivity

estimation-of-mortality-rates

catch-curve

selectivity

4 Age and length structured per-recruit models

per-recruit-models

leaf-rogers-bennett-jiao-2008-exploring-the-use-of-a-size-based-egg-per-recruit-model-for-the-red-abalone-fishery-in-california

evaluating-management-regimes-using-per-recruit-models-and-relative-stock-density-for-mississippi-s-spotted-seatrout

5 Feb 14 Matrix population models

matrix-population-models-v01

matrix-population-models-v01

matrix_pop_models

6 Feb 21 Model fitting

model-parameter-estimation

8 Mar 7 Bayesian Inference – Dr. Wu

Intro2Bayes

Bayesian In class

http://www.openbugs.net/Examples/Rats.html

distribution fitting

10 Mar 21 Stock and recruitment and Steepness

Stock Recruit data

Recruitment

11 Mar 28 Production models 01

Surplus Production Models

12 April 4 Production models 02

Bayesian Statistics Review

13 Apr 11 Catch survey analysis

Catch survey analysis Quiz

CSA In class

Catch Survey Analysis

CSA Model Fitting

14 Apr 18 Age- and length-structured models

Age-structured population assessment models

Cohort analysis

15 Apr 25 Fishery Reference Points

NOAA FTB ASAP

MS DMR Speckled Seatrout Assessment 2016

MS SST Summary 2016 MS Spotted Seatrout SA

16 May 2 Ecosystem Based Fishery Management